Recommended expert
Ege Okumuş
Guest Researcher, Dunkelmann Lab, Plant Synthetic Biology
Experience
Jun 2025 - Nov 2025
6 monthsPotsdam, Germany
Guest Researcher, Dunkelmann Lab, Plant Synthetic Biology
Max Planck Institute of Molecular Plant Physiology
- Developed and maintained data analysis pipelines for plant synthetic genomics with a focus on chloroplast engineering.
- Developed a pipeline to detect true NUPTs (nuclear plastid DNA insertions) in plant genomes using long-read sequencing data.
Jun 2024 - Aug 2024
3 monthsPotsdam, Germany
Research Intern, Molecular Biology and Genetics
PreOmics GmbH
- Experienced in applying statistical analysis to large-scale LC-MS/MS proteomics data, including biomarker discovery for non-small cell lung cancer (NSCLC).
- Specialized in applying the empirical Bayes method to protein-wise linear models.
- Developed R Shiny app for data visualization and interactive analysis.
Oct 2022 - Apr 2025
2 years 7 monthsMunich, Germany
M. Sc. Plant Sciences
Ludwig Maximilian University of Munich
Apr 2021 - Sep 2021
6 monthsBerlin, Germany
Erasmus+ Exchange Semester
Freie Universität Berlin
- Completion of Master’s level courses as a Bioinformatics student
Oct 2017 - Jun 2022
4 years 9 monthsİzmir, Turkey
B. Sc. Molecular Biology and Genetics
Izmir Institute of Technology
Sep 2012 - Jun 2017
4 years 10 monthsİstanbul, Turkey
High School
Kabatas High School
Summary
Experienced in applying statistical analysis to large-scale LC-MS/MS proteomics data, including biomarker discovery for non-small cell lung cancer (NSCLC). Specialized in applying the empirical Bayes method to protein-wise linear models. Further expertise includes R Shiny app development for data visualization and interactive analysis.
Skills
- R Studio: Shiny App, R Markdown
- Hpc & Linux/unix: Ssh Client, Bash Scripting
- Web Design: Html, Javascript
- Sequencing Workflows: Dorado, Deepmod2
- Embedded Systems: Arduino (C++)
- Python: Numpy, Scipy, Pandas
- Github
Languages
Turkish
NativeEnglish
AdvancedGerman
IntermediateEducation
Oct 2022 - Apr 2025
Ludwig Maximilian University of Munich
M. Sc. Plant Sciences · Plant Sciences · Munich, Germany
Apr 2021 - Sep 2021
Freie Universität Berlin
Bioinformatics · Berlin, Germany
Oct 2017 - Jun 2022
Izmir Institute of Technology
B. Sc. Molecular Biology and Genetics · Molecular Biology and Genetics · İzmir, Turkey
...and 1 more
Profile
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Frequently asked questions
Do you have questions? Here you can find further information.
Where is Ege based?
Ege is based in Potsdam, Germany.
What languages does Ege speak?
Ege speaks the following languages: Turkish (Native), English (Advanced), German (Intermediate).
How many years of experience does Ege have?
Ege has at least 12 years of experience. During this time, Ege has worked in at least 6 different roles and for 6 different companies. The average length of individual experience is 2 years. Note that Ege may not have shared all experience and actually has more experience.
What roles would Ege be best suited for?
Based on recent experience, Ege would be well-suited for roles such as: Guest Researcher, Dunkelmann Lab, Plant Synthetic Biology, Research Intern, Molecular Biology and Genetics, M. Sc. Plant Sciences.
What is Ege's latest experience?
Ege's most recent position is Guest Researcher, Dunkelmann Lab, Plant Synthetic Biology at Max Planck Institute of Molecular Plant Physiology.
What companies has Ege worked for in recent years?
In recent years, Ege has worked for Max Planck Institute of Molecular Plant Physiology, PreOmics GmbH, Ludwig Maximilian University of Munich, Freie Universität Berlin, and Izmir Institute of Technology.
Which industries is Ege most experienced in?
Ege is most experienced in industries like Education, Agriculture, and Biotechnology.
Which business areas is Ege most experienced in?
Ege is most experienced in business areas like Research and Development (R&D) and Business Intelligence.
Which industries has Ege worked in recently?
Ege has recently worked in industries like Education, Agriculture, and Biotechnology.
Which business areas has Ege worked in recently?
Ege has recently worked in business areas like Research and Development (R&D) and Business Intelligence.
What is Ege's education?
Ege holds a Master in Plant Sciences from Ludwig Maximilian University of Munich and a Bachelor in Molecular Biology and Genetics from Izmir Institute of Technology.
What is the availability of Ege?
Ege is immediately available full-time for suitable projects.
What is the rate of Ege?
Ege's rate depends on the specific project requirements. Please use the Meet button on the profile to schedule a meeting and discuss the details.
How to hire Ege?
To hire Ege, click the Meet button on the profile to request a meeting and discuss your project needs.
Average rates for similar positions
Rates are based on recent contracts and do not include FRATCH margin.
1000
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Market avg: 720-880 €
Market avg: 720-880 €
The rates shown represent the typical market range for freelancers in this position based on recent contracts on our platform.
Actual rates may vary depending on seniority level, experience, skill specialization, project complexity, and engagement length.
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