Krupali Poharkar - Research Associate | FRATCH

en
de

Jena, Germany

Experience

Nov 2019 - Dec 2024

5 years 2 months

Giessen, Germany

Research Associate

Institute of Anatomy and Cell Biology

Led single-cell and bulk RNA-seq analyses to identify rare airway and immune cell populations
Designed and deployed multiple interactive R Shiny and Streamlit dashboards for real-time data exploration and communication with clinical partners
Developed machine learning models for immunotherapy response prediction using single-cell transcriptomics and immune profiling data
Built reproducible pipelines for single-cell and bulk RNA-seq analyses aligned with clinical and research standards
Analyzed patient-derived datasets for biological marker identification using reproducible pipelines aligned with research and clinical standards
Translated computational outputs into clear biological insights for mixed technical and non-technical audiences

Apr 2012 - Apr 2016

4 years 1 month

India

Senior Research Fellow

ICAR Research Complex

Conducted whole-genome sequencing and comparative genomics on zoonotic pathogens (Listeria, Salmonella)
Identified virulence markers and contributed to PCR-based diagnostic kit development for public health use
Collaborated across microbiology, molecular biology, and bioinformatics teams to deliver actionable research outcomes

Aug 2010 - Sep 2011

1 year 2 months

Old Goa, India

Junior Research Fellow

ICAR Research Complex for Goa

Developed PCR-based diagnostic kits for Listeria monocytogenes
Maintained pathogen repositories and preserved cultures

Aug 2009 - Jul 2010

1 year

India

Senior Microbiologist

Azul Equator Pvt Ltd.

Performed standardized bacteriological examinations including CFU and coliform detection for quality control
Conducted statistical data analysis on water quality samples

Skills

Data Analysis With Python (Pandas)
Data Visualization With Python (Matplotlib, Seaborn)
Sql Querying And Database Modeling
Data Storytelling With Tableau
Cloud Computing And Automated Etl Pipelines
Data Collection With Python (Requests, Beautifulsoup, Apis)
A/b Testing
Unsupervised Machine Learning (K-means Clustering)
Supervised Machine Learning (Scikit-learn)
Generative Ai

Languages

English

Advanced

German

Intermediate

Education

Jul 2011 - Feb 2016

Goa University

Doctor of Philosophy, Biotechnology · Biotechnology · Panaji, India

Oct 2007 - Jun 2010

Rashtrasant Tukadoji Maharaj Nagpur University

Master of Science · Bio Technology · Nagpur, India

Oct 2004 - Jul 2008

Rashtrasant Tukadoji Maharaj Nagpur University

Bachelor of Science · Nagpur, India

Certifications & licenses

Data Science Course

WBS CODING SCHOOL

GMP Basic Course (english)

GMP Academy

National Legislation Of Laboratory Animal Science And Animal Welfare

Justus-Liebig-Universität Giessen

Species-Specific Training Course For Laboratory Mice

Justus-Liebig-Universität Giessen

Telc Deutsch-Test Für Zuwanderer

Bundesamt Für Migration Und Flüchtlinge

Maharashtra State Certificate In Information Technology (MS-CM)

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