Onur B. - bioinformatics

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Ankara, Turkey

Experience

Jan 2024 - Present

2 years

Ankara, Turkey

Kit Manager

AMGEN

Preparing materials for molecular biology experiments to be conducted in Türkiye within the scope of AMGEN's ABE program as part of the international class science project, supporting experiments and providing training.
Working on the 3D structure of genome.
Designing and developing tools for generating mcool files (Hi-C) from different approaches (GAMtools, HiC, etc.).

Jan 2024 - Present

2 years

İstanbul, Turkey

Part Time Researcher

Altınbaş University

Performing the analysis of FTIR and image data of samples obtained from urine and bladder tissue for bladder cancer diagnosis in the EU HORIZON-CL4-2023 project (project no: 101135175, project name: uCAIR).

Feb 2020 - May 2021

1 year 4 months

Ankara, Turkey

Researcher

Atilim University

Investigating the relationship between sound intensity, frequency, and auditory cortex neuronal firing with neural networks and machine learning.

Nov 2018 - Nov 2019

1 year 1 month

United States

Intern Researcher

Harvard Medical School

Adding generated tools to 4DNucleome Project Pipelines via AWS and Docker.
Developing an algorithm for a neuron model using the best design method.

Jan 2013 - Dec 2017

5 years

Turkey

CEO, Founder

ONBA Biotechnology

Generating a high-security cryptology algorithm based on the process that converts information in DNA into protein (the central dogma in molecular biology).

Jan 2010 - Present

16 years

Ankara, Turkey

System Administrator

Middle East Technical University

Updating and monitoring IT user accounts.
Working on Active Directory accounts.
Installation and maintenance of all systems within a given digital environment.
Producing documentation on operational, system and user procedures & guidelines.
Building, configuring and troubleshooting of server and desktop hardware.
Providing advice on selection and purchase of IT equipment.
Providing technical support and maintaining maximum availability of supported services for users.
Designing, implementing and managing Active Directory.
Responsible for disaster recovery, closing security loopholes and access levels.
Ensuring adequate antivirus protection & solutions are maintained and updated.
Identifying, recommending and executing improvements for the department web page.
Developing and maintaining the department’s web page, database and online automation system.

Jan 2009 - Dec 2010

2 years

Ankara, Turkey

Student Assistant

Middle East Technical University

Generating simple codes and tools for research laboratories.
Coordinating the computer laboratory.
Working on DNA cryptology.

Jun 2007 - Sep 2007

4 months

Rotterdam, Netherlands

Intern Student

Erasmus MC

Handling molecular biology techniques including DNA extraction, transformation, recombination, cloning, and analysis with full responsibility.
Using informatic tools such as MEGA4 and ClustalW.

Jan 2004 - Dec 2008

5 years

Ankara, Turkey

Research Student

Middle East Technical University

Handling molecular biology techniques including DNA extraction, transformation, recombination, cloning, and analysis with full responsibility.
Using informatic tools such as MEGA4 and ClustalW.