Binod R.
IRTA Fellow (Bioinformatics)
Experience
The Himalayan uplift and evolution of aquatic biodiversity across Asia: Snowtrout (Cyprininae: Schizothorax) as a test case
PLOS One
B Regmi, MR Douglas, K Wangchuk, ZD Zbinden, DR Edds, S Tshering, ... PLOS One 18 (10), e0289736
Geometric morphometric analyses define riverine and lacustrine species-flocks of Himalayan snowtrout (Cyprinidae: Schizothorax)
Aquatic Biology
MED Binod Regmi*, Marlis R. Douglas, David R. Edds Aquatic Biology 30, 19-31
Parallel introgression, not recurrent emergence, explains apparent elevational ecotypes of polyploid Himalayan snowtrout
Royal Society Open Science
TK Chafin, B Regmi, MR Douglas, DR Edds, K Wangchuk, S Dorji, ... Royal Society Open Science 8 (10), 210727
A dynamic linear model of monthly minimum and maximum temperature changes in three physiographic regions of the Central
Climate Research
B Regmi, S Lamichhane Climate Research 79, 1-8
Phylogenomics and Geometric Morphometrics Define Species Flocks of Snowtrout (Teleostei: Schizothorax) in the Central Himalayas
University of Arkansas
B Regmi University of Arkansas
Habitat type and climate zone correlate with genome size variation in osteichthyes fishes
B Regmi, Braj Wagle
RichPathR: a gene set enrichment analysis and visualization tool
bioRxiv
SRB Binod Regmi, Hong-Wei Sun, Andrew J Uhlman bioRxiv
Salinity and hydrological barriers have little influence on genetic structure of the mosquitofish in a coastal landscape shaped
Hydrobiologia
B Regmi, MR Douglas, WJB Anthonysamy, ME Douglas, PL Leberg Hydrobiologia 777 (1), 209-223
Summary
Innovative Bioinformatics Scientist/Developer trained in Statistics, Biology, and Programming with over 5 years of experience integrating statistics, biology and programming to drive clinical and multiomics research, and machine learning tool development. Proven track record designing and implementing 20+ robust, reproducible Snakemake workflows, efficiently processing over 20,000 bulk RNA-Seq, WGS, Exome, lrRNA, scRNA and spatial transcriptomic samples on HPC(Biowulf) and cloud (Azure) environments. Collaborated closely with 50+ researchers including Staff Scientists, Physician Scientists, and Research Investigators at NIH and abroad. Certified in Advanced Cancer Discovery (NIH/FAES) and Microsoft AZ-900. Passionate about advancing precision medicine by applying deep domain knowledge in population genetics, cancer biology and immunology, complemented by expertise in biostatistical analysis and scientific programming.
Languages
Education
University of Arkansas
M.Sc. · Statistics and Analytics · Fayetteville, United States
University of Arkansas
Ph.D. · Biological Sciences · Fayetteville, United States
Certifications & licenses
AZ-900
Microsoft
Advanced Cancer Biology Discovery Micro Credential And Digital Badge
Foundation For Advanced Study, Academic Program Of NIH
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